bes Updated for version 3.21.1
The Backend Server (BES) is the lower two tiers of the Hyrax data server
HDF5CFInt8.cc
Go to the documentation of this file.
1// This file is part of hdf5_handler: an HDF5 file handler for the OPeNDAP
2// data server.
3
4// Copyright (c) 2011-2023 The HDF Group, Inc. and OPeNDAP, Inc.
5//
6// This is free software; you can redistribute it and/or modify it under the
7// terms of the GNU Lesser General Public License as published by the Free
8// Software Foundation; either version 2.1 of the License, or (at your
9// option) any later version.
10//
11// This software is distributed in the hope that it will be useful, but
12// WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
13// or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
14// License for more details.
15//
16// You should have received a copy of the GNU Lesser General Public
17// License along with this library; if not, write to the Free Software
18// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
19//
20// You can contact OPeNDAP, Inc. at PO Box 112, Saunderstown, RI. 02874-0112.
21// You can contact The HDF Group, Inc. at 410 E University Ave,
22// Suite 200, Champaign, IL 61820
23
32
33#include <memory>
34#include <libdap/InternalErr.h>
35#include "HDF5CFInt8.h"
36#include <BESDebug.h>
37#include "h5common.h"
38
39using namespace std;
40using namespace libdap;
41
42HDF5CFInt8::HDF5CFInt8(const string &n, const string &d) : Int8(n, d)
43{
44
45}
46
47HDF5CFInt8::HDF5CFInt8(const string &n, const string &d,const string &d_f) : Int8(n, d),filename(d_f)
48{
49}
50
51BaseType *HDF5CFInt8::ptr_duplicate()
52{
53 auto HDF5CFInt8_unique = make_unique<HDF5CFInt8>(*this);
54 return HDF5CFInt8_unique.release();
55}
56
57bool HDF5CFInt8::read()
58{
59 BESDEBUG("h5","Coming to HDF5CFInt8 read "<<endl);
60
61 if (read_p())
62 return true;
63
64 hid_t file_id = H5Fopen(filename.c_str(),H5F_ACC_RDONLY,H5P_DEFAULT);
65 if(file_id < 0) {
66 throw InternalErr(__FILE__,__LINE__, "Fail to obtain the HDF5 file ID .");
67 }
68
69 hid_t dset_id = -1;
70 dset_id = H5Dopen2(file_id,dataset().c_str(),H5P_DEFAULT);
71 if(dset_id < 0) {
72 H5Fclose(file_id);
73 throw InternalErr(__FILE__,__LINE__, "Fail to obtain the dataset .");
74 }
75
76 hid_t dtypeid = H5Dget_type(dset_id);
77 if(dtypeid < 0) {
78 H5Dclose(dset_id);
79 H5Fclose(file_id);
80 throw InternalErr(__FILE__,__LINE__, "Fail to obtain the datatype .");
81 }
82
83 hid_t memtype = H5Tget_native_type(dtypeid, H5T_DIR_ASCEND);
84 if (memtype < 0){
85 H5Tclose(dtypeid);
86 H5Dclose(dset_id);
87 H5Fclose(file_id);
88 throw InternalErr(__FILE__, __LINE__, "Cannot obtain the native datatype.");
89 }
90
91 try {
92
93 dods_int8 buf;
94 get_data(dset_id, (void *) &buf);
95
96 set_read_p(true);
97 set_value(buf);
98
99 if(H5Tclose(memtype) < 0) {
100 throw InternalErr(__FILE__, __LINE__, "Unable to close the memory datatype.");
101 }
102 if(H5Tclose(dtypeid) < 0) {
103 throw InternalErr(__FILE__, __LINE__, "Unable to close the datatype id.");
104 }
105 // Release the handles.
106 if (H5Dclose(dset_id) < 0) {
107 throw InternalErr(__FILE__, __LINE__, "Unable to close the dset.");
108 }
109 H5Fclose(file_id);
110 }
111 catch(...) {
112 H5Tclose(memtype);
113 H5Tclose(dtypeid);
114 H5Dclose(dset_id);
115 H5Fclose(file_id);
116 throw;
117 }
118
119 return true;
120
121}
122
This class provides a way to map HDF5 int8 to DAP int16 for the CF option.
void get_data(hid_t dset, void *buf)